Basic Information
Locus ID:
gene-BS78_02G237600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 39426075 | 39429147 | + | gene-BS78_02G237600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 42,439.15 Da | 41.05 | 100.58 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 95 | 357 | 4.16376E-89 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 91 | 358 | 4.2E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 71 | 360 | 2.83E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 160 | 375 | 2.6E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 59 | 159 | 1.4E-26 | - |
| SMART | SM00220 | serkin_6 | 89 | 361 | 3.3E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 89 | 371 | 37.912346 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 204 | 216 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 95 | 117 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_020396113.1 | lysM receptor-like kinase isoform X1 [Zea mays] | 0 |
| D7UPN3 | LysM domain receptor-like kinase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=RLK10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4U6VY86 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G280401v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology