Basic Information
Locus ID:
gene-BS78_02G230200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Inositol polyphosphate phosphatase, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 38813745 | 38819551 | + | gene-BS78_02G230200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.67 | 130,514.68 Da | 45.93 | 74.66 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 613 | 954 | 5.5539E-95 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 618 | 945 | 3.3E-14 | IPR005135 |
| SUPERFAMILY | SSF101908 | Putative isomerase YbhE | 224 | 594 | 5.89E-20 | - |
| SUPERFAMILY | SSF56219 | DNase I-like | 590 | 977 | 7.05E-58 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 225 | 592 | 4.5E-11 | IPR015943 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 593 | 986 | 1.7E-99 | IPR036691 |
| SMART | SM00128 | i5p_5 | 611 | 960 | 1.7E-83 | IPR000300 |
| SMART | SM00320 | WD40_4 | 469 | 507 | 130.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 210 | 251 | 13.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 289 | 328 | 160.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 509 | 546 | 10.0 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 422 | 448 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 108 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1141 | 1179 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1153 | 1167 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05630.2 | Endonuclease/exonuclease/phosphatase family protein. Encodes an inositol polyphosphate 5-phosphatase with phosphatase activity toward only Ins(1,4,5)P3. Induced in response to ABA and wounding treatments. Expressed in young seedlings and flowers, while no transcripts were detectable in maturated roots, stems, and rosette leaves Modulates the development of cotyledon veins through its regulation of auxin homeostasis. Involved in blue light lightstimulated increase in cytosolic calcium ion. | 0 |
| RefSeq | XP_039795801.1 | type I inositol polyphosphate 5-phosphatase 13-like [Panicum virgatum] | 0 |
| Q9SYK4 | Type I inositol polyphosphate 5-phosphatase 13 OS=Arabidopsis thaliana OX=3702 GN=IP5P13 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811NBW8 | IPPc domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS12506 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology