Basic Information
Locus ID:
gene-BS78_02G219200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Glycosyl transferase family 8
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 37918762 | 37922822 | + | gene-BS78_02G219200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.35 | 80,202.03 Da | 35.97 | 85.89 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 406 | 700 | 1.06701E-116 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 375 | 686 | 4.5E-89 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 406 | 712 | 4.22E-68 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 410 | 705 | 2.4E-44 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 127 | - | - |
| Coils | Coil | Coil | 337 | 357 | - | - |
| Coils | Coil | Coil | 285 | 305 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_025799410.1 | probable galacturonosyltransferase 4 [Panicum hallii] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A811NAF2 | Hexosyltransferase OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS12631 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology