Basic Information
Locus ID:
gene-BS78_02G214200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Hsp90 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 37622439 | 37627349 | - | gene-BS78_02G214200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 88,905.42 Da | 46.36 | 77.61 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 86 | 282 | 1.91695E-97 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 100 | 259 | 5.5E-12 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 264 | 758 | 2.8E-193 | IPR001404 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 615 | 737 | 3.01E-32 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 335 | 593 | 3.26E-89 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 77 | 292 | 1.7E-61 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 506 | 592 | 3.1E-32 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 593 | 740 | 1.2E-52 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 62 | 307 | 5.9E-89 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 333 | 505 | 6.7E-73 | - |
| SMART | SM00387 | HKATPase_4 | 99 | 261 | 3.3E-5 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 56 | 778 | 3.9E-238 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 97 | 106 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 77 | 97 | 5.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 194 | 216 | 5.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 147 | 164 | 5.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 249 | 266 | 5.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 268 | 286 | 5.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 165 | 182 | 5.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 98 | 120 | 5.0E-63 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 70 | 737 | 26.129398 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 748 | 788 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 317 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_004957103.1 | heat shock protein 90-5, chloroplastic [Setaria italica] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811NML8 | HATPase_c domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS16823 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology