Basic Information
Locus ID:
gene-BS78_02G179200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 34290756 | 34296195 | + | gene-BS78_02G179200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.78 | 46,347.61 Da | 50.70 | 78.15 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 60 | 345 | 2.18597E-95 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 57 | 340 | 2.5E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 38 | 343 | 1.03E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 132 | 354 | 2.8E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 15 | 130 | 2.5E-34 | - |
| SMART | SM00220 | serkin_6 | 54 | 350 | 3.9E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 54 | 350 | 38.845192 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 189 | 201 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 415 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 422 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70740.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_002460194.1 | putative receptor-like protein kinase At4g00960 [Sorghum bicolor] | 0 |
| Q9CAC3 | Cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana OX=3702 GN=CRK43 PE=2 SV=2 | 0 | |
| TrEMBL | C5XC69 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3002G197600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg7347, jg9093 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_4298 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah025245 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g144300 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg42085, Sbi_jg48132 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg27489 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00023483 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl04042, Sgl05780, Sgl09108 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000002217, gene:ENSEOMG00000002427 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.6BG0013510 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30217820 |
| Apiaceae | Apium graveolens | 2 | Ag1G01656, Ag6G00582 |
| Arecaceae | Cocos nucifera | 3 | scaffold000092G000010, scaffold003798G000040 ... |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103706191, gene-LOC103715023 |
| Asteraceae | Flaveria trinervia | 4 | Ftri13G21325, Ftri5G02556, Ftri8G14401, Ftri9G24077 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G70740.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10018598m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g25920.v2.2 |
| Brassicaceae | Brassica nigra | 5 | BniB03g040590.2N, BniB03g048590.2N, BniB04g064830.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G0861 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G0931 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno11g08220 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate07g05420 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.1319 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00027708, Pov_00027735 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb2G14397, Lb2G14935 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.1871, BH03.2044, CH03.2224 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0534800, gene-QOZ80_6BG0487990 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0479660.1 |
| Poaceae | Oryza coarctata | 2 | Oco17G004550, Oco18G004600 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g24330.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G179200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0705338 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr10G010340, Chr14G013580, Chr21G012750 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G342900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG033270, gene_TRIDC5BG035150 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G206700.1, TraesCS5B02G204900.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb099320_P001, Zm00001eb312330_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-20002, nbis-gene-30873 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g30293, Zma_g32438 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG13.857, evm.TU.LG21.522 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc02g31340, gene.Posoc08g00140 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_15_RagTag.213 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-26437 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-17538 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000001l.64, evm.TU.utg000001l.134 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00004744 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-11591 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-2729 |
| Salicaceae | Populus euphratica | 3 | populus_peu07191, populus_peu21181, populus_peu21182 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132613864 |
| Solanaceae | Solanum chilense | 1 | SOLCI003965000 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107015749 |
| Tamaricaceae | Tamarix chinensis | 1 | TC01G2199 |
| Zosteraceae | Zostera marina | 1 | Zosma06g28220.v3.1 |