Basic Information
Locus ID:
gene-BS78_02G177300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 34051535 | 34054640 | - | gene-BS78_02G177300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.70 | 68,014.88 Da | 42.50 | 94.91 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 88 | 138 | 1.9E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 366 | 634 | 9.1E-23 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 71 | 1.1E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 55 | 219 | 4.68E-31 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 366 | 635 | 1.37E-43 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 327 | 437 | 1.3E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 440 | 655 | 1.1E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 224 | 6.2E-39 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 362 | 640 | 24.682924 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 256 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_039795126.1 | probable inactive receptor kinase RLK902 [Panicum virgatum] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4V6DEE1 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G207700v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology