Basic Information
Locus ID:
gene-BS78_02G167800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
F-box associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 33047107 | 33049715 | - | gene-BS78_02G167800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.16 | 41,496.15 Da | 46.64 | 82.78 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08268 | F-box associated domain | 203 | 301 | 1.9E-7 | IPR013187 |
| Pfam | PF00646 | F-box domain | 16 | 55 | 2.0E-7 | IPR001810 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 107 | 351 | 4.45E-7 | IPR011043 |
| SUPERFAMILY | SSF81383 | F-box domain | 18 | 62 | 1.7E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 15 | 52 | 3.3E-7 | - |
| SMART | SM00256 | fbox_2 | 16 | 56 | 2.6E-4 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 105 | 305 | 7.0E-22 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004956691.1 | putative F-box protein At2g02030 [Setaria italica] | 0 |
| TrEMBL | A0A2T7ERS6 | F-box domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G239500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology