Basic Information
Locus ID:
gene-BS78_02G157300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 31002079 | 31007457 | - | gene-BS78_02G157300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.66 | 57,692.14 Da | 54.22 | 78.41 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 222 | 490 | 3.01355E-99 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 220 | 418 | 9.8E-41 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 197 | 490 | 2.0E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 292 | 506 | 1.0E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 197 | 291 | 6.7E-31 | - |
| SMART | SM00220 | serkin_6 | 216 | 483 | 3.2E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 216 | 492 | 36.131462 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 338 | 350 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 222 | 243 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 162 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 162 | 179 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 128 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 63 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49270.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_008652581.1 | proline-rich receptor-like protein kinase PERK7 [Zea mays] | 0 |
| Q9XI96 | Proline-rich receptor-like protein kinase PERK7 OS=Arabidopsis thaliana OX=3702 GN=PERK7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A804QAM8 | Protein kinase domain-containing protein OS=Zea mays OX=4577 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH03.1636, BH03.1789, CH03.1953 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_02G157200, gene-BS78_02G157300 ... |