Basic Information
Locus ID:
gene-BS78_02G157200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 30971719 | 30975159 | - | gene-BS78_02G157200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 60,754.85 Da | 52.91 | 84.87 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 251 | 517 | 2.46131E-96 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 249 | 445 | 1.2E-41 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 227 | 517 | 2.93E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 321 | 531 | 1.3E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 230 | 320 | 1.8E-29 | - |
| SMART | SM00220 | serkin_6 | 245 | 510 | 5.7E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 245 | 519 | 35.877052 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 365 | 377 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 251 | 272 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 216 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 26 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49270.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_008652581.1 | proline-rich receptor-like protein kinase PERK7 [Zea mays] | 0 |
| Q9XI96 | Proline-rich receptor-like protein kinase PERK7 OS=Arabidopsis thaliana OX=3702 GN=PERK7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A804QAM8 | Protein kinase domain-containing protein OS=Zea mays OX=4577 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH03.1636, BH03.1789, CH03.1953 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_02G157200, gene-BS78_02G157300 ... |