Basic Information
Locus ID:
gene-BS78_02G152800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 30165924 | 30169351 | - | gene-BS78_02G152800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 102,383.75 Da | 36.52 | 104.61 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 193 | 252 | 1.7E-6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 485 | 503 | 1.3 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 668 | 906 | 3.5E-45 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 64 | 1.8E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 404 | 575 | 1.91E-40 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 655 | 935 | 9.17E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 53 | 257 | 8.28E-40 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 184 | 466 | 1.59E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 182 | 2.3E-36 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 650 | 744 | 7.6E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 183 | 288 | 3.0E-31 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 745 | 949 | 9.8E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 601 | 2.9E-80 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 93 | 116 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 117 | 141 | 89.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 479 | 502 | 160.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 666 | 922 | 9.0E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 548 | 573 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 215 | 239 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 263 | 287 | 8.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 503 | 527 | 22.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 265 | 287 | 7.142103 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 666 | 937 | 35.933586 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 789 | 801 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 503 | 516 | 3.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 482 | 495 | 3.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_002462225.1 | receptor-like protein kinase HSL1 [Sorghum bicolor] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | C5X9V3 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3002G172100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology