Basic Information
Locus ID:
gene-BS78_02G152600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 30127501 | 30130606 | + | gene-BS78_02G152600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 101,490.00 Da | 35.54 | 98.81 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 666 | 927 | 3.5E-46 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 211 | 270 | 1.6E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 92 | 113 | 1.0 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 62 | 4.6E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 652 | 930 | 2.97E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 183 | 443 | 1.03E-52 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 251 | 3.01E-41 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 399 | 567 | 8.16E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 180 | 5.1E-39 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 647 | 741 | 3.0E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 181 | 318 | 1.1E-33 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 742 | 947 | 7.9E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 319 | 588 | 1.6E-75 | IPR032675 |
| SMART | SM00220 | serkin_6 | 663 | 930 | 6.4E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 163 | 188 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 114 | 138 | 91.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 497 | 521 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 257 | 281 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 542 | 567 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 209 | 233 | 26.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 663 | 931 | 37.036041 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 786 | 798 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 497 | 510 | 4.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 212 | 225 | 4.3E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_002462225.1 | receptor-like protein kinase HSL1 [Sorghum bicolor] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | C5X9V3 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3002G172100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology