Basic Information
Locus ID:
gene-BS78_02G134200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
U-box domain-containing protein 33
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 23213120 | 23219556 | + | gene-BS78_02G134200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 93,768.00 Da | 43.81 | 81.77 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 773 | 813 | 1.60485E-21 | - |
| CDD | cd01989 | STK_N | 76 | 200 | 8.99272E-29 | - |
| Pfam | PF04564 | U-box domain | 769 | 840 | 7.1E-17 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 490 | 743 | 3.7E-43 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 73 | 189 | 2.01E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 472 | 753 | 1.6E-68 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 760 | 839 | 2.65E-22 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 467 | 561 | 3.8E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 562 | 757 | 4.3E-48 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 51 | 193 | 6.3E-5 | IPR014729 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 768 | 841 | 2.6E-25 | IPR013083 |
| SMART | SM00220 | serkin_6 | 489 | 756 | 3.0E-30 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 772 | 835 | 1.2E-23 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 489 | 756 | 33.149189 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 768 | 841 | 25.707371 | IPR003613 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 607 | 619 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 272 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 272 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 232 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 324 | - | - |
| Coils | Coil | Coil | 333 | 367 | - | - |
| Coils | Coil | Coil | 98 | 118 | - | - |
| Coils | Coil | Coil | 383 | 459 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_025804490.1 | U-box domain-containing protein 33-like [Panicum hallii] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2S3GXS0 | RING-type E3 ubiquitin transferase OS=Panicum hallii OX=206008 GN=PAHAL_2G133700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology