Basic Information
Locus ID:
gene-BS78_02G112600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 18303492 | 18310564 | - | gene-BS78_02G112600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 115,198.88 Da | 32.83 | 88.06 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 707 | 971 | 9.25436E-97 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 705 | 904 | 1.4E-43 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 434 | 620 | 2.2E-44 | IPR021720 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 681 | 971 | 1.01E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 101 | 389 | 1.33E-48 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 431 | 625 | 1.4E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 287 | 406 | 4.2E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 53 | 286 | 5.2E-49 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 672 | 776 | 2.7E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 777 | 985 | 9.2E-58 | - |
| SMART | SM00220 | serkin_6 | 701 | 978 | 3.3E-31 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 23 | 5.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 701 | 986 | 37.601398 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 822 | 834 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1038 | 1052 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1013 | 1059 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_039792120.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X1 [Panicum virgatum] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T0V714 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2NG114100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology