Basic Information
Locus ID:
gene-BS78_02G112500
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 18292709 | 18299283 | - | gene-BS78_02G112500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 115,039.60 Da | 33.30 | 87.92 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 709 | 976 | 4.79825E-98 | - |
| Pfam | PF11721 | Malectin domain | 435 | 622 | 3.3E-44 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 707 | 907 | 7.9E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 681 | 974 | 2.87E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 110 | 392 | 6.8E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 673 | 778 | 2.4E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 287 | 405 | 4.0E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 779 | 992 | 2.2E-56 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 432 | 627 | 5.0E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 286 | 8.8E-50 | IPR032675 |
| SMART | SM00220 | serkin_6 | 703 | 974 | 4.6E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 703 | 980 | 37.064308 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 709 | 731 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 824 | 836 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1014 | 1055 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1014 | 1047 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_022680284.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X1 [Setaria italica] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A368PWT3 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_2G097400v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology