Basic Information
Locus ID:
gene-BS78_02G104200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 17420972 | 17422900 | - | gene-BS78_02G104200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.52 | 65,823.91 Da | 41.62 | 80.87 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF19160 | SPARK | 6 | 145 | 3.2E-11 | IPR043891 |
| Pfam | PF00069 | Protein kinase domain | 312 | 580 | 3.4E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 292 | 583 | 3.73E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 387 | 605 | 9.3E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 284 | 386 | 1.1E-24 | - |
| SMART | SM00220 | serkin_6 | 311 | 591 | 5.1E-35 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 19 | 5.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 311 | 587 | 36.583752 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 428 | 440 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 232 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 597 | 632 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 202 | 232 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59110.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_025801351.1 | proline-rich receptor-like protein kinase PERK3 [Panicum hallii] | 0 |
| Q84M95 | Probable serine/threonine-protein kinase PBL28 OS=Arabidopsis thaliana OX=3702 GN=PBL28 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2S3GWZ2 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_2G088100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 1 | scaffold024094G000020 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103717896 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno05g13010 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g29490 |
| Poaceae | Oryza coarctata | 1 | Oco14G004500 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g12480.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G104200 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr24G003910, Chr28G003360 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-49353 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g4928 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g27770 |