Basic Information
Locus ID:
gene-BS78_02G092300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 10382393 | 10385340 | + | gene-BS78_02G092300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.61 | 23,961.90 Da | 86.34 | 46.39 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 8 | 43 | 5.7E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 48 | 3.79E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 7 | 55 | 1.0E-7 | - |
| SMART | SM00256 | fbox_2 | 9 | 50 | 4.0E-6 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 165 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 140 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 219 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039815301.1 | putative F-box protein At3g16210 [Panicum virgatum] | 0 |
| TrEMBL | A0A8T0R3M7 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6NG263400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology