Basic Information
Locus ID:
gene-BS78_02G088400
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 9756096 | 9767819 | + | gene-BS78_02G088400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 132,580.19 Da | 52.48 | 66.99 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 939 | 1196 | 2.66281E-115 | - |
| CDD | cd06410 | PB1_UP2 | 157 | 252 | 6.51234E-46 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 935 | 1195 | 1.7E-62 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 170 | 254 | 4.2E-18 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 169 | 255 | 4.25E-22 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 925 | 1193 | 1.2E-78 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 172 | 255 | 4.8E-14 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 926 | 1020 | 4.3E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1021 | 1210 | 1.0E-55 | - |
| SMART | SM00220 | serkin_6 | 933 | 1202 | 1.1E-60 | IPR000719 |
| SMART | SM00666 | PB1_new | 168 | 255 | 7.6E-32 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 933 | 1201 | 41.982941 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 24 | 6.0 | - |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 939 | 964 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1058 | 1070 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1167 | 1189 | 1.5E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1123 | 1145 | 1.5E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1015 | 1028 | 1.5E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1052 | 1070 | 1.5E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 637 | 696 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 130 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 649 | 663 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 440 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 676 | 696 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 523 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 511 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 146 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_021304085.1 | uncharacterized protein LOC8075992 isoform X2 [Sorghum bicolor] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6VSS7 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G124200v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology