Basic Information
Locus ID:
gene-BS78_02G085400
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 9017738 | 9019107 | + | gene-BS78_02G085400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.16 | 35,842.94 Da | 41.17 | 91.98 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 34 | 302 | 1.5E-56 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 22 | 310 | 8.36E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 26 | 122 | 5.1E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 123 | 319 | 4.4E-49 | - |
| SMART | SM00220 | serkin_6 | 34 | 302 | 2.2E-78 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 34 | 302 | 42.110146 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 40 | 63 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 154 | 166 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50860.2 | - | 0 |
| RefSeq | XP_004956043.1 | putative cyclin-dependent kinase F-2 [Setaria italica] | 0 |
| Q80YP0 | Cyclin-dependent kinase 3 OS=Mus musculus OX=10090 GN=Cdk3 PE=1 SV=3 | 0 | |
| TrEMBL | K3ZV25 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101756009 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH03.1060, CH03.1211 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_UnG0720890 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G085400 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-1301 |