Basic Information
Locus ID:
gene-BS78_02G056800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 5714365 | 5715033 | - | gene-BS78_02G056800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 10,781.81 Da | 56.04 | 72.75 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Coils | Coil | Coil | 51 | 71 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039834270.1 | uncharacterized protein LOC120695006 [Panicum virgatum] | 0 |
| TrEMBL | A0A8T0VZE4 | RAB6-interacting golgin OS=Panicum virgatum OX=38727 GN=PVAP13_2KG089000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH03.413, BH03.502, CH03.588 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G056800 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr28G002050 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g4822 |