Basic Information
Locus ID:
gene-BS78_02G054600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein FAR1-RELATED SEQUENCE
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 5432426 | 5439233 | + | gene-BS78_02G054600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 89,269.93 Da | 45.89 | 70.61 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10551 | MULE transposase domain | 321 | 413 | 2.6E-19 | IPR018289 |
| Pfam | PF03101 | FAR1 DNA-binding domain | 119 | 194 | 3.9E-11 | IPR004330 |
| SMART | SM00575 | 26again6 | 615 | 642 | 0.0058 | IPR006564 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 604 | 640 | 9.82901 | IPR007527 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 741 | 763 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039793601.1 | protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Panicum virgatum] | 0 |
| TrEMBL | A0A811NKR9 | Protein FAR1-RELATED SEQUENCE OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS18320 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology