Basic Information
Locus ID:
gene-BS78_02G043700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 4291630 | 4292259 | + | gene-BS78_02G043700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 17,044.23 Da | 36.03 | 80.24 | 0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 27 | 125 | 2.49895E-35 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 40 | 119 | 1.2E-20 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 25 | 125 | 3.83E-31 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 25 | 131 | 2.2E-30 | IPR008972 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 19 | 5.0 | - |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 27 | 127 | 35.705956 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002459383.1 | basic blue protein [Sorghum bicolor] | 0 |
| A0A072U307 | Blue copper protein 1b OS=Medicago truncatula OX=3880 GN=BCP1B PE=2 SV=1 | 0 | |
| TrEMBL | C5XAB2 | Phytocyanin domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3002G044600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology