Basic Information
Locus ID:
gene-BS78_02G030800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 2832402 | 2835753 | - | gene-BS78_02G030800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 49,787.27 Da | 51.48 | 84.30 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 130 | 405 | 3.4E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 129 | 408 | 7.11E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 206 | 413 | 2.8E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 133 | 205 | 4.3E-23 | - |
| SMART | SM00220 | serkin_6 | 127 | 407 | 8.4E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 127 | 413 | 37.21978 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 133 | 155 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 248 | 260 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66930.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039835667.1 | rust resistance kinase Lr10-like [Panicum virgatum] | 0 |
| P93604 | Rust resistance kinase Lr10 OS=Triticum aestivum OX=4565 GN=LRK10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1E5WMH4 | Rust resistance kinase Lr10 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0000392 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology