Basic Information
Locus ID:
gene-BS78_02G015000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 1299103 | 1301200 | + | gene-BS78_02G015000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.62 | 49,347.20 Da | 51.04 | 78.34 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 361 | 420 | 5.64E-7 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 140 | 311 | 5.33E-6 | IPR013320 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 359 | 440 | 4.3E-10 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 208 | 328 | 1.8E-6 | - |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 386 | 415 | - | IPR017441 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002461030.2 | L-type lectin-domain containing receptor kinase IX.1 [Sorghum bicolor] | 0 |
| TrEMBL | A0A1W0W797 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3002G377400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH03.131, BH03.146, BH04.1794, CH03.209 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G015000, gene-BS78_08G090500 |