halophFGD

Basic Information

Locus ID: gene-BS78_02G014300

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	1250477	1252031	+	gene-BS78_02G014300

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.27	44,274.47 Da	51.23	90.38	-0.06

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	9	47	1.9E-6	IPR001810
SUPERFAMILY	SSF81383	F-box domain	9	75	7.98E-12	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	10	48	3.2E-6	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_039793076.1	uncharacterized protein LOC120659080 [Panicum virgatum]	0
TrEMBL	A0A8T0W2K1	F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2KG023400 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Paspalum vaginatum	2	gene-BS78_02G014200, gene-BS78_02G014300