halophFGD

Basic Information

Locus ID: gene-BS78_02G014200

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	1241805	1243070	+	gene-BS78_02G014200

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.88	47,264.45 Da	44.62	87.29	-0.15

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF12937	F-box-like	5	43	3.9E-7	IPR001810
SUPERFAMILY	SSF81383	F-box domain	5	56	3.27E-11	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	6	45	8.8E-7	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_039793076.1	uncharacterized protein LOC120659080 [Panicum virgatum]	0
TrEMBL	A0A8T0W2K1	F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2KG023400 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Paspalum vaginatum	2	gene-BS78_02G014200, gene-BS78_02G014300