Basic Information
Locus ID:
gene-BS78_02G007300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 765372 | 768675 | + | gene-BS78_02G007300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.65 | 77,142.96 Da | 48.71 | 101.78 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 442 | 710 | 4.66777E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 439 | 703 | 1.6E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 155 | 214 | 4.1E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 75 | 1.1E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 57 | 313 | 4.08E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 421 | 707 | 4.05E-74 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 93 | 1.1E-8 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 397 | 511 | 4.2E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 512 | 713 | 2.1E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 94 | 323 | 1.5E-62 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 131 | 154 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 155 | 177 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 249 | 272 | 86.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 273 | 297 | 73.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 201 | 225 | 4.3 | IPR003591 |
| SMART | SM00220 | serkin_6 | 436 | 714 | 3.3E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 436 | 715 | 39.735634 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 27 | 7.0 | - |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 442 | 470 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 556 | 568 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 201 | 214 | 6.7E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 156 | 169 | 6.7E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_025804266.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Panicum hallii] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3GVI4 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_2G007700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology