Basic Information
Locus ID:
gene-BS78_02G003900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 491370 | 497130 | + | gene-BS78_02G003900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.31 | 96,431.88 Da | 51.86 | 73.58 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 53 | 146 | 4.20685E-37 | - |
| CDD | cd13999 | STKc_MAP3K-like | 604 | 861 | 8.04366E-110 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 601 | 861 | 8.5E-63 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 68 | 145 | 2.3E-8 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 587 | 860 | 3.05E-76 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 65 | 154 | 1.18E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 686 | 873 | 3.3E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 591 | 685 | 1.5E-23 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 70 | 149 | 9.0E-6 | - |
| SMART | SM00220 | serkin_6 | 598 | 865 | 4.2E-53 | IPR000719 |
| SMART | SM00666 | PB1_new | 64 | 149 | 2.9E-15 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 598 | 865 | 41.601322 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 723 | 735 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 680 | 693 | 5.4E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 788 | 810 | 5.4E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 832 | 854 | 5.4E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 717 | 735 | 5.4E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 451 | 538 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 549 | 565 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 451 | 572 | - | - |
| Coils | Coil | Coil | 382 | 402 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16270.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_034581860.1 | dual specificity protein kinase shkD-like [Setaria viridis] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6VY93 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G005000v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology