Basic Information
Locus ID:
gene-BS78_01G502800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein of unknown function (DUF674)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 53149140 | 53150765 | - | gene-BS78_01G502800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 33,760.32 Da | 46.67 | 98.07 | -0.04 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025792183.1 | uncharacterized protein LOC112873452 [Panicum hallii] | 0 |
| TrEMBL | A0A8T0NA52 | DUF674 family protein OS=Panicum virgatum OX=38727 GN=PVAP13_9NG778400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | AH01.5106 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_3BG0296450 |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.1HG0075250.1, HORVU.MOREX.r3.4HG0413000.2 ... |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_062937, gene-QYE76_071335, gene-QYE76_071336 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G502800 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0100642, Pt_Chr0100660, Pt_Chr0100663 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr01G038660 |
| Poaceae | Thinopyrum elongatum | 5 | Tel1E01G446600, Tel4E01G571500, Tel4E01G571600 ... |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC4BG058660, gene_TRIDC4BG058770 ... |
| Poaceae | Triticum aestivum | 19 | TraesCS1A02G273800.1, TraesCS1B02G283500.1 ... |