Basic Information
Locus ID:
gene-BS78_01G498400
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 52796978 | 52801011 | - | gene-BS78_01G498400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.03 | 56,282.89 Da | 44.20 | 86.34 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 198 | 464 | 3.08894E-102 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 195 | 463 | 1.2E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 171 | 466 | 7.72E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 268 | 475 | 2.6E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 166 | 267 | 6.9E-33 | - |
| SMART | SM00220 | serkin_6 | 192 | 470 | 5.0E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 192 | 469 | 37.827545 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 314 | 326 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 198 | 220 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 474 | 505 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 164 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 474 | 500 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039780224.1 | probable serine/threonine-protein kinase At1g01540 [Panicum virgatum] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8T0P927 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_9KG546500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology