Basic Information
Locus ID:
gene-BS78_01G483200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 51554504 | 51558385 | + | gene-BS78_01G483200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 110,542.44 Da | 30.34 | 102.33 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 720 | 1004 | 5.5E-41 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 76 | 2.0E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 536 | 595 | 3.1E-9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 712 | 1007 | 1.64E-67 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 261 | 601 | 5.49E-69 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 67 | 313 | 1.59E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 225 | 387 | 9.3E-56 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 148 | 224 | 5.2E-19 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 811 | 1030 | 3.5E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 388 | 634 | 3.3E-69 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 147 | 2.9E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 708 | 810 | 1.2E-15 | - |
| SMART | SM00369 | LRR_typ_2 | 198 | 222 | 6.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 342 | 366 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 463 | 486 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 294 | 318 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 558 | 582 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 438 | 462 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 126 | 150 | 250.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 718 | 1007 | 5.7E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 718 | 1014 | 36.527214 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 857 | 869 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 558 | 571 | 4.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 513 | 526 | 4.7E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_002465865.1 | MDIS1-interacting receptor like kinase 1 [Sorghum bicolor] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | C5WY01 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3001G506100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology