Basic Information
Locus ID:
gene-BS78_01G457900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 49773412 | 49780304 | - | gene-BS78_01G457900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 79,255.71 Da | 42.05 | 83.84 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 431 | 699 | 6.13877E-89 | - |
| Pfam | PF13855 | Leucine rich repeat | 159 | 219 | 1.0E-11 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 44 | 84 | 7.3E-7 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 427 | 696 | 5.5E-40 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 406 | 696 | 1.14E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 257 | 1.28E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 504 | 722 | 5.3E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 43 | 270 | 3.2E-43 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 389 | 502 | 7.8E-27 | - |
| SMART | SM00369 | LRR_typ_2 | 109 | 135 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 182 | 205 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 206 | 228 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 158 | 181 | 21.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 425 | 699 | 35.73571 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 160 | 182 | 7.065096 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 431 | 454 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 396 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_004985464.1 | protein STRUBBELIG-RECEPTOR FAMILY 6 isoform X1 [Setaria italica] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | K4A683 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101771878 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology