Basic Information
Locus ID:
gene-BS78_01G435000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 47886919 | 47890295 | - | gene-BS78_01G435000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 34,942.58 Da | 41.87 | 93.75 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 16 | 315 | 5.7E-75 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 11 | 320 | 1.7E-80 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 5 | 316 | 1.5E-99 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 276 | 323 | 1.1 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 4 | 256 | 2.9E-6 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 3 | 317 | 50.695385 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_025795721.1 | homocysteine S-methyltransferase 1 [Panicum hallii] | 0 |
| Q9FUN0 | Homocysteine S-methyltransferase 1 OS=Zea mays OX=4577 GN=HMT-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3L6TVM7 | Homocysteine S-methyltransferase 1 OS=Panicum miliaceum OX=4540 GN=C2845_PM01G07770 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology