Basic Information
Locus ID:
gene-BS78_01G434800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 47872000 | 47876198 | - | gene-BS78_01G434800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 53,444.90 Da | 40.92 | 83.66 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 27 | 347 | 3.7E-81 | IPR000490 |
| Pfam | PF07983 | X8 domain | 365 | 436 | 4.7E-18 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 27 | 348 | 3.74E-87 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 26 | 353 | 5.4E-116 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 358 | 456 | 2.4E-9 | - |
| SMART | SM00768 | X8_cls | 364 | 449 | 3.4E-49 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_002468258.1 | glucan endo-1,3-beta-glucosidase 3 [Sorghum bicolor] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1E5WE14 | Glucan endo-1,3-beta-glucosidase 3 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0003341 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology