Basic Information
Locus ID:
gene-BS78_01G432800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 47707635 | 47709174 | + | gene-BS78_01G432800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.56 | 35,418.22 Da | 49.72 | 95.14 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06623 | PKc_MAPKK_plant_like | 44 | 310 | 1.08315E-117 | - |
| Pfam | PF00069 | Protein kinase domain | 46 | 306 | 1.7E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 43 | 313 | 1.25E-66 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 36 | 330 | 1.5E-62 | - |
| SMART | SM00220 | serkin_6 | 46 | 306 | 7.2E-72 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 46 | 306 | 43.028854 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 52 | 75 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 163 | 175 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73500.1 | MAP kinase kinase 9. member of MAP Kinase Kinase family. Autophosphorylates and also phosphorylates MPK3 and MPK6. Independently involved in ethylene and calmalexin biosynthesis. Induces transcription of ACS2, ACS6, ERF1, ERF2, ERF5, ERF6, CYP79B2, CYP79B3, CYP71A13 and PAD3. | 0 |
| RefSeq | XP_039779209.1 | mitogen-activated protein kinase kinase 9-like [Panicum virgatum] | 0 |
| Q9FX43 | Mitogen-activated protein kinase kinase 9 OS=Arabidopsis thaliana OX=3702 GN=MKK9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0NVM3 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_9KG540100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology