Basic Information
Locus ID:
gene-BS78_01G416400
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 46439538 | 46441470 | - | gene-BS78_01G416400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 58,022.36 Da | 63.27 | 69.63 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 46 | 137 | 6.8E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 8 | 522 | 8.15E-44 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 374 | 513 | 7.4E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 7 | 151 | 7.3E-29 | - |
| SMART | SM00220 | serkin_6 | 1 | 507 | 1.1E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 516 | 20.49926 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 102 | 114 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 177 | 209 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 514 | 537 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 209 | - | - |
| Coils | Coil | Coil | 295 | 315 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45590.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_004984992.3 | receptor-like serine/threonine-protein kinase At2g45590 [Setaria italica] | 0 |
| O64639 | Receptor-like serine/threonine-protein kinase At2g45590 OS=Arabidopsis thaliana OX=3702 GN=At2g45590 PE=2 SV=1 | 0 | |
| TrEMBL | K4A882 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101759602 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 5 | jg14060, jg1856, jg2361, jg29282, jg29283 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_16074, gene_23254 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah019022 |
| Amaranthaceae | Salicornia bigelovii | 5 | Sbi_jg15437, Sbi_jg4374, Sbi_jg49449, Sbi_jg56238 ... |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg26713, Seu_jg5791 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00000330, GOSA_00003587 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl02097, Sgl07251, Sgl11225, Sgl16620 |
| Amaranthaceae | Chenopodium album | 5 | gene:ENSEOMG00000013138, gene:ENSEOMG00000032517 ... |
| Amaranthaceae | Chenopodium quinoa | 5 | CQ.Regalona.r1.1AG0005910, CQ.Regalona.r1.2BG0023820 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30003320, pistato.v30181860 |
| Apiaceae | Apium graveolens | 3 | Ag2G01946, Ag4G01755, Ag6G01643 |
| Arecaceae | Cocos nucifera | 2 | COCNU_07G008820, COCNU_10G006830 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103702803, gene-LOC103708198, gene-LOC120105910 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.2220.V1.1, AsparagusV1_06.829.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri3G16705, Ftri6G17759 |
| Brassicaceae | Arabidopsis thaliana | 3 | AT2G45590.1, AT4G25390.1, AT5G51770.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10001343m.g.v1.0, Thhalv10015950m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 3 | Sp4g27640.v2.2, Sp6g13990.v2.2, Sp7g23410.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB01g001390.2N, BniB02g081810.2N, BniB08g017630.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq02G0459, Ceq02G2049 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl02G0488, Cgl02G2117 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno03g07530 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate01g24720, gene.Thate08g06080 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-6114, nbisL1-mrna-9484 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG01.2244, evm.TU.LG04.220 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00032212, Pov_00040870 |
| Plumbaginaceae | Limonium bicolor | 5 | Lb1G01158, Lb1G03176, Lb1G04377, Lb1G07883, Lb3G18826 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_3AG0241290, gene-QOZ80_3BG0286800 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.4HG0391450.1 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_036650, gene-QYE76_069280 |
| Poaceae | Oryza coarctata | 4 | Oco05G008330, Oco06G008610, Oco19G001550, Oco20G001760 |
| Poaceae | Oryza sativa | 2 | LOC_Os03g14710.1, LOC_Os10g10870.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G416400 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0102064, Pt_Chr0102085, Pt_Chr0401564 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr01G029650, Chr0G013690, Chr0G033230, Chr12G009880 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel4E01G386800, Tel7E01G881700 |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC1BG067930, gene_TRIDC2BG018310 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS4A02G081400.1.cds1, TraesCS4B02G222400.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb010820_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-2241, nbis-gene-42969 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g13080, Zma_g1631 |
| Portulacaceae | Portulaca oleracea | 5 | evm.TU.LG01.1344, evm.TU.LG11.1567, evm.TU.LG14.635 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g18130 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_11_RagTag.1306, evm.TU.Scaffold_4_RagTag.188 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-12614 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-2735, nbisL1-mrna-4195 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-12882 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000008l.42, add.evm.TU.utg000010l.135 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00000084, Maker00008568 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-17139, nbisL1-mrna-17660 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-20652, nbisL1-mrna-6220 |
| Salicaceae | Populus euphratica | 5 | populus_peu27814, populus_peu29197, populus_peu30553 ... |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132631797, gene-LOC132645625 |
| Solanaceae | Solanum chilense | 2 | SOLCI000199700, SOLCI007133000 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107008565, gene-LOC107012571 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.29220_chr11_-, STRG.6327_chr04_+ |
| Tamaricaceae | Tamarix chinensis | 2 | TC03G2711, TC06G1825 |
| Zosteraceae | Zostera marina | 1 | Zosma01g03020.v3.1 |