Basic Information
Locus ID:
gene-BS78_01G404200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 45509046 | 45511940 | + | gene-BS78_01G404200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 61,728.28 Da | 58.74 | 78.79 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 228 | 496 | 4.76802E-110 | - |
| Pfam | PF00069 | Protein kinase domain | 225 | 427 | 5.9E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 209 | 503 | 1.75E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 297 | 514 | 9.7E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 194 | 296 | 4.6E-34 | - |
| SMART | SM00220 | serkin_6 | 222 | 494 | 3.3E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 222 | 507 | 38.336369 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 228 | 250 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 341 | 353 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 518 | 562 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 529 | 562 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49270.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021319171.1 | proline-rich receptor-like protein kinase PERK15 [Sorghum bicolor] | 0 |
| Q9XI96 | Proline-rich receptor-like protein kinase PERK7 OS=Arabidopsis thaliana OX=3702 GN=PERK7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1B6QP58 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3001G424200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH01.4204, BH01.4522, CH01.202, CH01.4819 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0242550, gene-QOZ80_3BG0285630 |
| Poaceae | Oryza coarctata | 1 | Oco05G009310 |
| Poaceae | Oryza sativa | 3 | LOC_Os03g16260.1, LOC_Os03g38710.1, LOC_Os09g14580.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G404200 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g1549 |