Basic Information
Locus ID:
gene-BS78_01G373300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Short Name:
NIN1
Description:
Alkaline and neutral invertase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 43051840 | 43059364 | + | gene-BS78_01G373300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 69,501.57 Da | 55.33 | 90.14 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12899 | Alkaline and neutral invertase | 142 | 583 | 9.5E-218 | IPR024746 |
| SUPERFAMILY | SSF48208 | Six-hairpin glycosidases | 150 | 575 | 3.74E-54 | IPR008928 |
| Gene3D | G3DSA:1.50.10.10 | - | 167 | 571 | 7.5E-15 | IPR012341 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 108 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56560.1 | Plant neutral invertase family protein. | 0 |
| RefSeq | XP_002465359.1 | neutral/alkaline invertase 1, mitochondrial [Sorghum bicolor] | 0 |
| Q10MC0 | Neutral/alkaline invertase 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=NIN1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A835EGK8 | Alkaline/neutral invertase OS=Digitaria exilis OX=1010633 GN=HU200_044877 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology