Basic Information
Locus ID:
gene-BS78_01G354300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
NAC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 41315989 | 41318270 | - | gene-BS78_01G354300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.29 | 22,699.75 Da | 50.69 | 73.48 | -0.82 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14415 | UBA_NACA_NACP1 | 161 | 206 | 2.1577E-18 | - |
| Pfam | PF19026 | HYPK UBA domain | 167 | 206 | 2.5E-12 | IPR044034 |
| Pfam | PF01849 | NAC domain | 67 | 122 | 8.1E-23 | IPR002715 |
| Gene3D | G3DSA:1.10.8.10 | - | 168 | 205 | 4.0E-19 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 73 | 126 | 8.4E-32 | IPR038187 |
| SMART | SM01407 | NAC_2 | 67 | 123 | 1.7E-26 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 64 | 129 | 17.778694 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 170 | - | - |
| Coils | Coil | Coil | 3 | 35 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_039786075.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Panicum virgatum] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0NPK8 | NAC-A/B domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_9KG445400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology