Basic Information
Locus ID:
gene-BS78_01G336500
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Short Name:
CAX2
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 39888617 | 39892720 | + | gene-BS78_01G336500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 47,585.95 Da | 39.88 | 109.11 | 0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 99 | 254 | 2.4E-21 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 291 | 425 | 1.8E-19 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 128 | 268 | 1.4E-16 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 274 | 429 | 3.0E-19 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 79 | 428 | 1.1E-104 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 66 | 428 | 1.3E-121 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_039827080.1 | vacuolar cation/proton exchanger 2-like isoform X1 [Panicum virgatum] | 0 |
| Q5KQN0 | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A811MG16 | Vacuolar cation/proton exchanger OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS2058 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology