Basic Information
Locus ID:
gene-BS78_01G329600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 39364923 | 39366874 | - | gene-BS78_01G329600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.56 | 67,592.32 Da | 34.80 | 97.80 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 326 | 583 | 3.9E-37 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 37 | 294 | 2.7E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 325 | 582 | 5.53E-60 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 12 | 298 | 5.26E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 399 | 595 | 5.9E-46 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 106 | 312 | 1.3E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 327 | 398 | 5.6E-25 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 7 | 105 | 2.0E-22 | - |
| SMART | SM00220 | serkin_6 | 33 | 300 | 5.8E-31 | IPR000719 |
| SMART | SM00220 | serkin_6 | 321 | 587 | 1.0E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 321 | 586 | 27.241177 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 33 | 300 | 36.979504 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 149 | 161 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 39 | 61 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_025792059.1 | probable LRR receptor-like serine/threonine-protein kinase At2g28960 [Panicum hallii] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7CCB0 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G457900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G0409 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0250330, gene-QOZ80_3AG0250370 |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.5HG0520990.1.CDS1 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_01G329200, gene-BS78_01G329600 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G709800 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC5AG064500, gene_TRIDC5AG064520 ... |
| Poaceae | Triticum aestivum | 8 | TraesCS2B02G538400.1.cds1, TraesCS5A02G449700.1.cds1 ... |