Basic Information
Locus ID:
gene-BS78_01G329200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 39338109 | 39339761 | - | gene-BS78_01G329200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.29 | 61,276.44 Da | 46.23 | 87.60 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 253 | 497 | 7.9E-27 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1 | 196 | 2.6E-28 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 202 | 2.02E-45 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 225 | 498 | 2.11E-51 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 213 | 2.1E-49 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 315 | 517 | 2.4E-41 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 222 | 314 | 4.0E-20 | - |
| SMART | SM00220 | serkin_6 | 248 | 501 | 3.1E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 200 | 26.138725 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 248 | 502 | 22.011597 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 50 | 62 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 254 | 277 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_002465198.2 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Sorghum bicolor] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A811MVL0 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS7352 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G0409 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0250330, gene-QOZ80_3AG0250370 |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.5HG0520990.1.CDS1 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_01G329200, gene-BS78_01G329600 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G709800 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC5AG064500, gene_TRIDC5AG064520 ... |
| Poaceae | Triticum aestivum | 8 | TraesCS2B02G538400.1.cds1, TraesCS5A02G449700.1.cds1 ... |