HalophFGD

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Basic Information
Locus ID: gene-BS78_01G324300
Species & Taxonomic ID: Paspalum vaginatum & 158149
Genome Assembly: GCA_026573395.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr1 38783032 38784897 + gene-BS78_01G324300
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.92 43,844.81 Da 49.13 82.87 0.05
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 14 50 2.7E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 4 53 5.23E-10 IPR036047
Gene3D G3DSA:1.20.1280.50 - 12 56 1.7E-6 -
SMART SM00256 fbox_2 15 56 0.0083 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_047056698.1 uncharacterized protein LOC124662974 [Lolium rigidum] 0
TrEMBL A0A2T7CBI3 F-box domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G445100 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 4 AH02.1987, BH01.3734, BH09.193, CH01.3899
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.6HG0556640.1.CDS1
Poaceae Lolium multiflorum 2 gene-QYE76_020230, gene-QYE76_020231
Poaceae Paspalum vaginatum 1 gene-BS78_01G324300
Poaceae Triticum aestivum 1 TraesCS6B02G136000.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.