Basic Information
Locus ID:
gene-BS78_01G319000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Short Name:
WRKY4
Description:
DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 38331153 | 38339450 | - | gene-BS78_01G319000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.38 | 51,281.36 Da | 65.26 | 53.76 | -0.84 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 198 | 254 | 2.9E-24 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 368 | 425 | 1.6E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 196 | 256 | 7.19E-25 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 359 | 427 | 1.44E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 352 | 428 | 1.8E-35 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 190 | 257 | 4.8E-27 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 197 | 255 | 2.9E-33 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 367 | 426 | 1.4E-39 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 198 | 256 | 23.720404 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 362 | 427 | 37.458855 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 354 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 425 | 482 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 482 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_008657198.2 | probable WRKY transcription factor 4 [Zea mays] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | C5WVP7 | WRKY transcription factor 3 OS=Sorghum bicolor OX=4558 GN=SORBI_3001G332500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology