Basic Information
Locus ID:
gene-BS78_01G303800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Mitogen-activated protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 36977878 | 36981667 | - | gene-BS78_01G303800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 42,478.87 Da | 44.53 | 89.20 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07858 | STKc_TEY_MAPK | 34 | 370 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 45 | 327 | 2.3E-71 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 44 | 334 | 1.75E-98 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 24 | 364 | 2.5E-160 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 125 | 354 | 2.5E-160 | - |
| SMART | SM00220 | serkin_6 | 41 | 327 | 3.8E-98 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 41 | 327 | 46.406883 | IPR000719 |
| ProSitePatterns | PS01351 | MAP kinase signature. | 76 | 179 | - | IPR003527 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 163 | 175 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 47 | 71 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G01370.1 | MAP kinase 4. Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization. | 0 |
| RefSeq | XP_002467591.1 | mitogen-activated protein kinase 6 [Sorghum bicolor] | 0 |
| Q336X9 | Mitogen-activated protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MPK6 PE=2 SV=1 | 0 | |
| TrEMBL | C5WUG0 | Mitogen-activated protein kinase OS=Sorghum bicolor OX=4558 GN=SORBI_3001G315700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology