Basic Information
Locus ID:
gene-BS78_01G265600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 32167528 | 32170378 | - | gene-BS78_01G265600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.86 | 42,705.79 Da | 44.58 | 72.90 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 172 | 253 | 3.92E-7 | IPR036047 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 168 | 217 | 8.676143 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 341 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 364 | 383 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025876669.1 | uncharacterized protein LOC112936659 [Oryza sativa Japonica Group] | 0 |
| TrEMBL | A0A811MCB6 | F-box domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS2717 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | BH01.2963, BH01.4175, BH06.1098, CH01.4454 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_3BG0275730 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G265600 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr02G008660, Chr03G017000, Chr03G017010, Chr05G024820 ... |