Basic Information
Locus ID:
gene-BS78_01G252200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 26467452 | 26470941 | - | gene-BS78_01G252200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 79,919.57 Da | 44.62 | 86.72 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 406 | 673 | 1.41124E-92 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 403 | 673 | 1.4E-47 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 212 | 290 | 8.9E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 82 | 164 | 2.2E-11 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 384 | 673 | 1.75E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 188 | 292 | 2.3E-18 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 476 | 687 | 2.9E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 376 | 475 | 4.5E-36 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 68 | 166 | 5.3E-13 | IPR038408 |
| SMART | SM00220 | serkin_6 | 400 | 673 | 9.4E-35 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 181 | 292 | 16.217287 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 62 | 167 | 13.275354 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 400 | 681 | 38.774521 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 406 | 428 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 521 | 533 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_039834724.1 | cysteine-rich receptor-like protein kinase 10 [Panicum virgatum] | 0 |
| Q0D5R2 | Cysteine-rich receptor-like protein kinase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T0XDW1 | Cysteine-rich receptor-like protein kinase 10 OS=Panicum virgatum OX=38727 GN=PVAP13_1KG252931 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology