Basic Information
Locus ID:
gene-BS78_01G252100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 26454694 | 26458026 | - | gene-BS78_01G252100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.78 | 74,660.93 Da | 50.30 | 90.24 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 363 | 629 | 1.69446E-89 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 26 | 123 | 1.2E-17 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 360 | 628 | 1.5E-45 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 164 | 244 | 1.3E-10 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 341 | 656 | 3.51E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 18 | 125 | 3.4E-21 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 136 | 247 | 9.0E-19 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 433 | 641 | 3.6E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 316 | 432 | 2.7E-37 | - |
| SMART | SM00220 | serkin_6 | 357 | 634 | 9.0E-31 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 20 | 126 | 18.407896 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 137 | 247 | 16.325912 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 357 | 644 | 37.700336 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 478 | 490 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.2 | - | 0 |
| RefSeq | XP_039834730.1 | cysteine-rich receptor-like protein kinase 10 [Panicum virgatum] | 0 |
| Q0D5R2 | Cysteine-rich receptor-like protein kinase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T0XPI4 | Cysteine-rich receptor-like protein kinase 10 OS=Panicum virgatum OX=38727 GN=PVAP13_1KG207900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology