Basic Information
Locus ID:
gene-BS78_01G205800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Extension to Ser/Thr-type protein kinases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 16518496 | 16522714 | - | gene-BS78_01G205800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 63,888.73 Da | 46.17 | 68.66 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 111 | 478 | 0.0 | - |
| Pfam | PF00433 | Protein kinase C terminal domain | 433 | 477 | 4.6E-6 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 116 | 414 | 2.6E-64 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 94 | 465 | 6.88E-87 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 111 | 196 | 9.1E-63 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 197 | 261 | 9.1E-63 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 309 | 432 | 3.4E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 433 | 443 | 3.4E-43 | - |
| SMART | SM00133 | pkinase_C_6 | 415 | 479 | 1.3E-6 | IPR000961 |
| SMART | SM00220 | serkin_6 | 113 | 414 | 5.1E-103 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 415 | 487 | 13.484739 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 113 | 414 | 47.749611 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 119 | 142 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 232 | 244 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 499 | 554 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03920.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_021306967.1 | serine/threonine-protein kinase tricorner [Sorghum bicolor] | 0 |
| Q9NBK5 | Serine/threonine-protein kinase tricornered OS=Drosophila melanogaster OX=7227 GN=trc PE=1 SV=1 | 0 | |
| TrEMBL | A0A811MPA9 | Serine/threonine-protein kinase tricorner-like OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS8608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology