Basic Information
Locus ID:
gene-BS78_01G160900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 12474460 | 12475514 | - | gene-BS78_01G160900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 36,812.13 Da | 47.50 | 89.07 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 21 | 302 | 1.1E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 17 | 314 | 2.56E-67 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 93 | 328 | 2.1E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 12 | 89 | 1.3E-11 | - |
| SMART | SM00220 | serkin_6 | 21 | 302 | 3.6E-64 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 21 | 302 | 38.576645 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 27 | 50 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 129 | 141 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63370.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039780519.1 | putative cyclin-dependent kinase F-2 [Panicum virgatum] | 0 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8T0NJW1 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_9KG086500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology