Basic Information
Locus ID:
gene-BS78_01G160500
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 12460689 | 12461660 | - | gene-BS78_01G160500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 35,383.15 Da | 47.40 | 89.75 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 37 | 305 | 7.0E-60 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 26 | 307 | 1.62E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 30 | 321 | 1.0E-71 | - |
| SMART | SM00220 | serkin_6 | 37 | 305 | 1.3E-75 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 37 | 305 | 43.707287 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 43 | 66 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 158 | 170 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_004956445.1 | putative cyclin-dependent kinase F-2 [Setaria italica] | 0 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 0 | |
| TrEMBL | K4A299 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101763856 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology